Full Stack Bioinformatics

Tailored to your needs!

Our Services

Bioinformatic Solutions

  • - Workflow automation and optimization
  • - Genome assembly, variant calling, annotation, comparative genomics and phylogenomics
  • - Heterogeneous data integration and machine learning 

Web App development

  • - Online, interactive data analytics and visualization
  • - Dashboards
  • - REST APIs
  • - SQL and NoSQL databases
  • - Cloud/Docker deployment 

Microbiome Analytics

  • - Metagenomic assembly, binning, and gene cataloging
  • - Functional and Taxonomic analysis
  • - Metabolic pathway mapping and visualization

Built with

Our Portfolio

A selection of bioinformatic web apps for online data analysis and visualization

FuncTree2

Visualization of -omics profiles on interactive biological ontologies. >>

 

GOmixer

Gut meta-omics data analysis and visualization in one GO >>

JMDB

Microbiome cohort analytics and interactive visualization

Clients

Who we are

Founder

Youssef Darzi

Youssef is a bioinformatician with 15 years of experience. As Head of Bioinformatics at a top Japanese genetic testing firm, he led various critical projects, such as a clinical WGS pipeline, co-designing an Asian Ancestry kit, and streamlining and automating their bioinformatics processes. Youssef co-developed iPath3 and Functree2 while a PostDoc at the Yamada Lab (Tokyo Tech). During his PhD at the lab of Jeroen Raes (KU Leuven / VUB), he worked on gut microbiome multi-omics integration, and pioneered biome-specific analysis of meta-omics data through GOmixer, the GMMs and the GBMs.
Threads Linkedin
Schedule a Meeting

Get in touch

Interested in using our services?

Simply fill out the form below and we will promptly get in touch

Linkedin Github
  • ©2024 Omixer